dc.contributor.advisor |
Bragadin, Marcantonio |
it_IT |
dc.contributor.advisor |
Cuttitta, Angela |
it_IT |
dc.contributor.author |
Masullo, Tiziana <1979> |
it_IT |
dc.date.accessioned |
2012-05-23T09:54:27Z |
it_IT |
dc.date.accessioned |
2012-07-30T16:05:33Z |
|
dc.date.available |
2012-05-23T09:54:27Z |
it_IT |
dc.date.available |
2012-07-30T16:05:33Z |
|
dc.date.issued |
2012-03-15 |
it_IT |
dc.identifier.uri |
http://hdl.handle.net/10579/1201 |
it_IT |
dc.description.abstract |
In this study, two GFP from two species of Cnidaria: Aequorea coerulescens and Anemonia sulcata, have been characterized according to the UV – Vis spectroscopy investigations. The goal has been achieved evaluating their fluorescence behaviour in presence of potentially toxic metal ions. A. coerulescens was considered the control system to compare results obtained on the GFP that was extracted from A. sulcata and was partially purified. For the rAcGFP, the small quenching effects in the emission spectrum in the observed conditions suggested that the fluorophore had a low capacity to discriminate the presence of different metals. Different results was obtained for AsGFP about the evolution and the value of quenching effect on the fluorescent emission for all metals used. In fact, the metal – protein bond seemed to be selective. The bond effect changed with the different metals investigated. The order of quenching on the emission protein was Cu(II)˃Pb(II)˃Cd(II). |
it_IT |
dc.description.abstract |
In questo studio, due GFP provenienti da due distinte specie di Cnidaria: Aequorea coerulescens e Anemonia sulcata, sono state caratterizzate in accordo con la spettroscopia Uv –Vis. L’obiettivo consisteva nel valuare il comportamento della fluorescenza di tali proteine in presenza di metalli potenzialmente tossici. A. coerulescens è stata considerata il sistema controllo a cui comparare i risultati ottenuti sulla GFP estratta e parzialmente purificata da A. sulcata. Per rAcGFP, il limitato effetto di quenching sull’emissione, nelle condizioni osservate suggeriva la scarsa capacità del fluoroforo di discriminare i metalli investigati. Differenti risultati sono stati ottenuti per AsGFP circa l’andamento ed il valore del quenching sull’emissione in fluorescenza, in presenza dei metalli usati. Infatti, il legame metallo – proteina appariva selettivo. L’effetto del legame cambiava con i metalli investigati. L’ordine di quenching sull’emissione della proteina era Cu(II)˃Pb(II)˃Cd(II). |
it_IT |
dc.format.medium |
Tesi cartacea |
it_IT |
dc.language.iso |
en |
it_IT |
dc.publisher |
Università Ca' Foscari Venezia |
it_IT |
dc.rights |
© Tiziana Masullo, 2012 |
it_IT |
dc.subject |
Green Fluorescent Protein (GFP) |
it_IT |
dc.title |
Identification and characterization of fluorescent protein from marine organisms and potentially applications |
it_IT |
dc.type |
Doctoral Thesis |
it_IT |
dc.degree.name |
Scienze ambientali |
it_IT |
dc.degree.level |
Dottorato di ricerca |
it_IT |
dc.degree.grantor |
Scuola di dottorato in Scienze e tecnologie (SDST) |
it_IT |
dc.description.academicyear |
2010/2011 |
it_IT |
dc.description.cycle |
24 |
it_IT |
dc.degree.coordinator |
Pavoni, Bruno |
it_IT |
dc.location.shelfmark |
D001131 |
it_IT |
dc.location |
Venezia, Archivio Università Ca' Foscari, Tesi Dottorato |
it_IT |
dc.rights.accessrights |
openAccess |
it_IT |
dc.thesis.matricno |
955664 |
it_IT |
dc.format.pagenumber |
[3], 82 p. : ill. |
it_IT |
dc.subject.miur |
BIO/13 BIOLOGIA APPLICATA |
it_IT |
dc.description.tableofcontent |
Abstract 1
Chapter 1: Introduction 5
1.1. Structure of AsGFP and its chromophore 5
1.2. Biochemical and Spectral Characteristics of AsGFP 8
1.3. Photoswitching of asFP595 13
1.4. Effects of metals on GFP’s fluorescence intensity 17
Chapter 2: Spectroscopic characterization of recombinant Green Fluorescent Protein from Aequorea coerulescens (rAcGFP1) and its behavior in presence of potentially toxic metal ions 24
2.1. Biology of Aequorea coerulescens 24
2.2. Materials and methods 26
2.3. Results and discussion 28
2.3.1. rAcGFP spectroscopic characterization 28
2.3.2. Metals solutions spectroscopic characterization 32
2.3.3. rAcGFP with metals spectroscopic characterization 33
2.4. Conclusions 40
Chapter 3: Identification and characterization of Green Fluorescent Protein (GFP) from Anemonia sulcata (Forskal, 1775) and its environmental applications 41
3.1. Biology of Anemonia sulcata 41
3.2. Materials and methods 43
3.2.1. Sample collection and confocal microscopy analysis 43
3.2.2. Protein extraction assay 43
3.2.3. Sodium dodecyl sulphate - polyacrylamide gel electrophoresis (SDS-PAGE) 43
3.2.4. Gel filtration and HPLC 44
3.2.5. Spectral analysis of partially purified sample and metal solutions 44
3.2.6. Dot Blot assay 46
3.3. Results 47
3.3.1. Confocal microscopy results 47
3.3.2. Biochemical characterization of partially purified sample 50
3.3.3. Spectroscopic characterization 53
3.3.3.1. Partially purified sample 53
3.3.3.2. Metals solutions 57
3.3.3.3. Partially purified sample and metals solutions 57
3.3.4. Dot Blot assay results 67
3.4. Discussion 68
3.5. Conclusion 72
Appendixes 74
Acknowledgments 76
References 77 |
it_IT |
dc.identifier.bibliographiccitation |
Masullo, Tiziana. “Identification and characterization of Fluorescent Protein from marine organisms and potentially applications”, Università Ca’ Foscari Venezia, tesi di dottorato, 24. Ciclo, 2012 |
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